Analysis of Stem-Cell and Migratory Phenotype in Primary Cultures Derived From BPV-Infected Benign and Malignat Neoplasms

Analysis of Stem-Cell and Migratory Phenotype in Primary Cultures Derived From BPV-Infected Benign and Malignat Neoplasms Rodrigo Pinheiro Araldi1,2, Thaylene Alexandra do Nascimento Lima1, Diego, Grando Módolo1, Jacqueline Mazzuchelli de Souza1,2, Roberta Fiusa Magnelli1,2, Beatriz Maurício3, Diva Denelle Spadacci Morena4, Paulo Luiz de Sá Júnior1, Rodrigo Franco de Carvalho1, Willy Beçak1, Rita de Cassia Stocco1,* 1Genetics Laboratory, Butantan Institute, São Paulo, Brazil 2Interunit Post-graduation Program in Biotechnology, Biomedicine Institute, University of São Paulo (USP), São Paulo, Brazil 3Cell Biology Laboratory, Butantan Institute, São Paulo, Brazil 4Physiopathology Laboratory, Butantan Institute, São Paulo, Brazil Research Open Access

Bovine papillomavirus (BPV) is the etiopathogenic agent of bovine papillomatosis, an infectious and neoplastic disease characterized by multiple benign neoplasms (papillomas) that can regress spontaneously, but may also persist leading to urinary bladder and esophageal carcinoma when in presence of co-factors [1][2][3][4]. BPV is also considered a useful model to study the HPV-associated oncogenic process, once these vi-ruses share morphological and pathogenic characteristics in common [5][6][7]. For this reason, virologists have used BPV as a model for the study of HPV infection and interaction with the host cell [8].
Although studies had demonstrated that both BPV [1,2,[9][10][11] and HPV induce DNA damages, can lead to genomic instability and cancer initiation [12,13], there are few works about the action of these viruses in metastasis, which is responsible for about 90% of all cancer-related deaths globally [6].
Metastatic process consists of a long series of sequential and interrelated steps in which cancer cells from primary neoplasm spread to distant organs [14]. During this process, it is verified biochemical, genetics and morphological changes that epithelial-mesenchymal transition (EMT), a biological reprogramming process which confers migratory and invasiveness capability do transformed cells [6,15]. The lack of studies involving the papillomaviruses (PVs) participation in EMT can be attributed to the little attention given to primary cultures derived from PVs-infected neoplasms. In this sense, our group has showed that primary cultures derived from BPV-infected neoplasms are useful models to study the genetic [9] and biochemical deregulations, contributing to genomic instability and cell transformation [7]. Genomic instability is pointed out as responsible to induce the cancer stem-cell (CSC) phenotype acquisition [16][17][18], repressing reversibly the expression of cell differentiation genes [19], contributing to EMT and metastasis [20]. Considering that we first reported genetic and biochemical changes in BPV-infected cells derived from neoplasms, in this study we analyzed the acquisition of CSC phenotype, as well as the invasiveness capability of primary culture cells derived from cutaneous papilloma, fibropapilloma and esophageal carcinoma.

Ethics statement
This study was approved by the Ethics Committee of Butantan Institute under process 1319-14.

Primary cell cultures
Primary cells cultures used was obtained by Campos et al. (2013) from fragments of: normal skin, showing no morphological alteration, skin papilloma (papilloma 01), fibropapilloma (papilloma 02 and 03) and esophageal carcinoma. These tissues were collected from adult bovines (Bos taurus). Cells were seeded in culture flasks of 25 cm2, containing 5 mL of complete medium: DMEM medium (Cultilab, Brazil), supplemented with 15% fetal bovine serum (Cultilab, Brazil) and 1% ampicillin-streptomycin (Cultilab, Brazil). Cells were incubated at 37ºC, in 5% of CO2 atmosphere up to 80% confluence (about 72 hours). Cells were cultivated until the sixth passage (P1-P6). Molecular identification of BPV was performed by PCR using specific primers for BPV-1 and 2, considered the most frequent virus types [21] and, BPV-4, due its association with upper gastric papilloma and carcinoma [9,22]. PCR results were already published in Araldi et al.(2016 a), demonstrating the BPV infection in primary cell cultures of papilloma 01, 02, 03 and esophageal carcinoma, but not in normal skin. These results are summarized in table 1.

Tumorsphere formation assay
Cells were subjected to the tumorsphere formation assay, method considered "gold-standard" to identify the acquisition of stem-cell phenotype [23,24].

Materials and Methods
For this, 5x105 cells in second passage (P2) were transferred to six-well plate pre-covered with 1 mL of 2% agarose, diluted in sterile PBS and 2 mL of complete medium. Cells were incubated at 37ºC with 5% CO2 atmosphere for 24 hours. Next, the cells were analyzed in Nikon Eclipse Ti inverted microscope and images were captured in total magnification of 100X.

Immunodetection of Oct-3/4 transcription factor
Immunofluorescence: a total of 1 x 105 cells in second passage (P2) were seeded per well, employing a six-well plate, containing 2 mL of complete DMEM medium and a 24 x 24 mm sterile cover slip. Cells were incubated at 37ºC, with 5% CO2 atmosphere, until a confluency of 80% (about 24 hours). The medium was removed and cells were washed three times with sterile PBS at 37ºC for five minutes. Cells were fixated with 4.0% formalin, diluted in PBS, at 4ºC for 30 minutes and then washed three times with PBS at 37ºC for 5 minutes. Cells were permeabilized with 0.01% Triton X-100 (Sigma, Germany), diluted in PBS, at 4ºC for 10 minutes. Cells were washed once with PBS and incubated overnight at 4ºC, in a moist chamber with polyclonal antibody anti-Oct-3/4 H-65 produced in rabbit (Santa Cruz Biotechnology, USA) at 1:100 dilution in 1% bovine serum albumin (BSA). Cells were washed three times with PBS for five minutes and then incubated at 4ºC for 3 hours with anti-rabbit IgG conjugated with FITC (Sigma, Germany) at 1:200 dilution in 1.0% BSA. Cells were washed three times with PBS and cover slips were mounted on slides, using 20 μL of ProLong Gold (Invitrogen, Carlsbad, USA) with DAPI. Slides were analyzed in Axio Scope A1 fluorescent microscope (Carls Zeiss, Germany) under total magnification of 400X. Flow cytometry: Cell lines were seeded in culture flasks of 25 cm2 with 5 mL of complete DMEM medium. Cells were subjected to monolayer disaggregation with 2 mL of EDTA solution and centrifuged at 1,700 rpm for 5 minutes. Cells were transferred to 1.5 mL polypropylene tubes and fixed in 1.0 mL of 1.0% formalin solution at 4ºC for 2 hours. Cell suspension was centrifuged and washed twice with 1.0 mL of PBS at 4ºC to remove the formalin residues. Cell were incubated with 1.0% BSA at 4ºC for 20 minutes, washed once with PBS, and incubated overnight at 4ºC with 1.0 μL of anti-Oct-3/4 produced in rabbit (Santa Cruz Biotechnology, USA). Cells were centrifuged under described conditions, washed twice with PBS and incubated at 4ºC for 2 hours with anti-rabbit conjugated with Alexa Fluor 488 secondary antibody (Invitrogen, Carlsbad, USA) at 1:200 dilution in 1% BSA. Next, cells were washed with PBS, centrifuged and resuspended in 100 μL of PBS. The material was analyzed in Accuri C6 cytometer (BD Bioscience, USA), employing the FL1 channel. A total of 10,000 events were analyzed. Results were analyzed in FlowJo software (TreeStar, Oregon, USA), using the percentage of immune-labeled cells. Skin papilloma cell line incubated with only secondary antibody was used as control for immunofluorescence and flow cytometry.  Results based on Araldi et al. [7] Analysis of stem-cell phenotype

Morphological analysis
Morphological analysis of six passages (P1-P6) was performed using a phase contrast microscopy, employing the Nikon Eclipse Ti inverted microscope (Nikon, Japan) in total magnification of 100 X. This method was used to identify morphological alterations suggestive of migratory phenotype, such as lamellipodia and filopodia, which are directly associated to cell migration and EMT. To better visualize the ultrastructure of these organelles, cell lines in fourth passage (P4) were subjected to screen electronic microscopy (SEM). Cell lines were seeded in six-well plate containing a 24 x 24 mm sterile cover slip and 2 mL of complete DMEM medium up the 80% of confluence. Medium was removed and cells were washed three times with sterile PBS at 4ºC. Cells were fixated in 1 mL of Karnovsky fixative (50 mL 8% paraformaldehyde, 10 mL 25% glutaraldehyde, 40 mL 0.2 M PBS, pH 7.3), processed and analyzed in Quanta 250 (Fei Company, Holland) in a primary beam accelerated at 10-15 V in different magnifications.

F-actin labelling
To confirm the presence of filipodia, cells were labelled with phalloidin and analyzed by High-content screening (HCS). Cells were expanded in 96-well plate (Corning, USA), using DMEM complete medium until to obtain 5 x 103 cells/cm3. Cells were fixed in 4% paraformaldehyde and washed three times with PBS. Cells were permeabilized with 0.1% Triton X-100 (Sigma, Germany) diluted in PBS for 10 minutes and labelled with phalloidin (Sigma, Germany). Cells were washed three time with PBS and the nucleus were labelled with 0.1 g/mL of Hoechst 33342 (Molecular Probe, USA) for 10 minutes. The plates were analyzed in HSC (Molecular Devices, USA) and the imagens were captured using the software MicroHCS (Molecular Devices, USA).

Time-lapse microscopy for cell migration
Cell migration was analyzed by time-lapse video microscopy, employing the InCell Analyzer 2200 (GE Healthcare, USA). A total of 200 μL of DMEM complete medium were transferred to six-well plates. A total of 2 x 105 cells in second passage (P2) was transferred per well.
The plate was incubated at 37ºC, with 5% CO2, and one picture was taken every 15 minutes, completing a total of 80 time-points (20 hours). The images were analyzed using the ImageJ 1.5e software, and the average speed, in μm/minute, of each time-point in a total of five cells per cell line was calculated. Based on these values, it was performed the analysis of variance (ANOVA), followed by the Tukey test, both with 5% of significance level, using the GraphPad Prism 5.0.     Considering this result, we performed the Tukey's multiple comparison test (table 2), which showed that primary cultures derived from esophageal carcinoma and papilloma 03 (fibropapilloma) showed the highest migration velocity, indicating the acquisition of migratory phenotype. Papilloma 01 (skin papilloma) showed an intermediated migration velocity (table 2), while papilloma 02 (fibropapilloma) and normal skin did not show statistical difference, presenting the lower migration velocity.

Discussion
Although recognized as oncogenic viruses [5], the PVs action following cancer initiation remains unclear [6]. This because little attention has been given to primary cell cultures derived from BPV-infected tissues. However, in last decades, studies have been shown productive infection in sites not passive of cell differentiation, such as placenta [25] and peripheral blood [11,26], indicating the need to review the PVs natural history [5]. Moreover, since 2008 our group has been explored the potential of primary cell cultures as model to study the BPV pathology [27]. We already demonstrated that in vitro models present cytogenetic aberrations [9] similar to those verified in vivo [1,28,29]. Currently we also verified that primary cultures derived from skin papilloma, fibropapillomas and EC present glycolytic metabolic deregulation [7]. Similar results were also observed in cell cultures derived from equine sarcoid [30]. Despite these advances, the PVs action during metastasis remains unclear. Thus, we analyze the acquisition of stem-cell and migratory phenotype in primary cell cultures derived from skin papilloma, fibropapilloma and esophageal carcinoma. In this pioneering study, we verified the presence of tumorspheres in all BPV-infected primary cell cultures, but not in normal skin cells (figure 1). We also observed an increase in Oct-3/4 transcription factor in primary cultures derived from BPV-infected tissues in relation to normal skin cells ( figure 2). These results suggest that BPV-infected cells present biological reprograming, leading to stem-cell phenotype acquisition.
Considering that stem-cells are inducible by increasing genomic instability [31], BPV E6 oncoprotein has a central role in biological reprograming process, once this oncoprotein induces genotoxicity and clastogenesis [32]. Moreover, studies have showed that both BPV [7] and HPV E6 promote oxidative stress, increasing the reactive oxygen species (ROS) production [33]. The E6 pro-oxidant activity can lead to PI3K and Akt phosphorylation, resulting in Oct-3/4 activation [23], justifying the nuclear labelling of this transcription factor verified in esophageal carcinoma cells ( figure 3). Once activated, the Oct-3/4 binds to AGTCAAAT motif sequence present in target genes, contributing to stem-cell phenotype maintenance [34], as well as leading to apoptosis resistance. In this regard, the E6 oncoprotein promotes the p53 downregulation, avoiding the Bax protein translocation from Golgi complex to mitochondria, conferring an additional anti-apoptotic mechanism [35]. The apoptosis resistance is crucial to guarantee the survival during cell migration. Considering the biology of metastatic process, in which cancer cells are continuously exposed to different selective pressures during the migration process, the acquisition of apoptosis resistance is mandatory to guarantee the cell survival. For this reason, during the EMT is expected the acquisition of CSC-like phenotype [20]. However, the main characteristic of EMT is the loss of cell adhesion as a consequence of biochemical and genetics reprograming that lead to mesenchymal phenotype acquisition [36]. These reversible alterations confer invasiveness and migratory capability to cancer cells [37], allowing then to reach and colonize distant organs, resulting in metastasis. Based on these data, we also analyzed the acquisition of migratory phenotype as additional evidences of EMT.
Our results showed the loss of apical-basal polarity in skin papilloma, fibropapilloma and esophageal carcinoma cells ( figure 4). This morphological alteration was not verified in normal skin cells ( figure 4). In addition, we observed the presence of lamellipodia and filopodia in all BPV-infected primary cell cultures ( figure 4). These protrusions were also verified by SEM analysis ( figure 6).
Filopodia are transient organelles with 0.1-0.2 μm, composed by F-actin monomers, asymmetrically and perpendicularly to lamelipodia, being associated to cell migration [38,39]. Therefore, we also verified the F-actin labelling in lamelipodia sites (figure 5), confirm the results of phase contrast (figure 4) and screen electron microscopy ( figure 6). The F-actin labelling in lamelipodia sites was observed in skin papilloma, fibropapilloma and esophageal carcinoma cells (figure 5), suggesting that BPV interacts with cytoskeleton, leading to filopodia formation. However, further evidences are necessary to better understand this interaction.
Based on the morphological analysis, we verified the cell velocity migration by time-lapse video microscopy. Results showed that papilloma 03 (fibropapilloma) and esophageal carcinoma cells presented the highest average speed, indicating the acquisition of migratory phenotype (figure 7, table 2). Papilloma 01 (skin papilloma) showed an intermediated migration velocity (figure 7, table 2). Normal skin and papilloma 02 (fibropapilloma) did not show statistical difference (figure 7, table 2). We also observed the presence of inter-cytoplasmic bridges in skin papilloma (figure 6C), fibropapilloma (figure 6H) and esophageal carcinoma cells ( figure 3I). Although little attention has been given to these structures, they can acts as vehicle of horizontal genetic transfers, since DNA sequences were already described into these inter-cytoplasmic bridges [40].
Considering that BPV genome is found in epissomal form, these bridges can contribute to the maintenance of BPV DNA sequences along the six passages, as previous described by us using these same cell cultures [7].
In summary, our results demonstrate that primary culture derived from PVs-infected lesions can be useful models to study the viral pathology, showing BPV as an inducer the stem-cell phenotype acquisition and cell migration. These data combined to the cell metabolic deregulation, already verified with the same in vitro model [7], are important evidences for papillomavirus infection as a relevant EMT promoter.